Three Cheese Stuffed Shells Recipe

Perfect comfort food awaits in this creamy Three Cheese Stuffed Shells recipe that transforms ordinary pasta into something extraordinary.
cheesy pasta stuffed shells

Why You’ll Love these Three Cheese Stuffed Shells

These Three Cheese Stuffed Shells are about to become your new favorite comfort food.

I’m talking about jumbo pasta shells filled with a rich blend of ricotta, mozzarella, and parmesan cheese—what’s not to love? The creamy filling pairs perfectly with tangy marinara sauce, creating that classic Italian flavor profile we all crave.

What makes these shells special? The garlic and fresh parsley elevate the cheese mixture beyond basic, while the two-step baking process guarantees perfectly melted cheese on top.

The contrast between the tender pasta, gooey filling, and that golden, bubbling cheese crust is simply irresistible.

What Ingredients are in Three Cheese Stuffed Shells?

Making these three cheese stuffed shells requires a handful of simple ingredients that come together to create something truly magical. The recipe centers around jumbo pasta shells that get filled with a creamy, herb-infused cheese mixture and baked in marinara sauce until bubbly and golden. What I love about this dish is how it transforms basic ingredients into something that feels special enough for Sunday dinner but is still doable on a weeknight.

  • 12 ounces jumbo pasta shells
  • 32 ounces ricotta cheese
  • 3 cups shredded mozzarella cheese (divided: 2 cups for filling, 1 cup for topping)
  • 1/2 cup plus 2 tablespoons grated Parmesan cheese (divided)
  • 2 eggs
  • 1 tablespoon fresh chopped parsley
  • 3 garlic cloves, minced
  • 1/2 teaspoon salt
  • 1/2 teaspoon pepper
  • 28 ounce jar spaghetti sauce
  • Nonstick cooking spray (for the baking dish)

When shopping for these ingredients, quality matters, especially with the cheeses. Whole milk ricotta tends to be creamier than part-skim, making for a richer filling. Fresh garlic rather than pre-minced makes a noticeable difference in flavor, and if you can spring for a good quality marinara sauce (or make your own), the entire dish will be elevated. And while the recipe calls for fresh parsley, you could substitute dried in a pinch—just use about one teaspoon instead of the tablespoon called for fresh.

How to Make these Three Cheese Stuffed Shells

three cheese stuffed shells

Making these stuffed shells is all about layering flavors and textures to create the perfect bite. I start by preheating my oven to 350°F and coating a 9×13 baking dish with nonstick cooking spray – this step might seem small, but trust me, you’ll thank yourself later when cleanup is a breeze.

While the oven heats up, I cook the 12-ounce package of jumbo pasta shells according to the package directions. The key here is to cook them just until al dente – slightly undercooked is actually perfect since they’ll continue to soften in the oven.

Next comes the dreamy cheese filling, which is where all the magic happens. In a large bowl, I combine 32 ounces of ricotta cheese, 2 cups of shredded mozzarella (saving that last cup for topping), 1/2 cup of Parmesan cheese, 2 eggs, 1 tablespoon of fresh chopped parsley, 3 minced garlic cloves, and 1/2 teaspoon each of salt and pepper. This mixture should be well-blended but still have some texture.

Before filling those shells, I spread 1 cup of spaghetti sauce evenly across the bottom of my prepared baking dish – this prevents sticking and adds flavor from below. Then comes the slightly messy but totally worth it part: spooning about a tablespoon of the ricotta mixture into each cooked shell. A pastry tube or even a plastic storage bag with the corner snipped off makes this job much easier, turning what could be a frustrating task into something almost therapeutic. For an ultra-smooth cheese filling with perfect consistency, a premium potato ricer can also be used to ensure your ricotta is lump-free.

Once all shells are filled and nestled into the sauce, I pour the remaining spaghetti sauce over the top and cover the dish with aluminum foil. These babies then bake for 40 minutes before I reveal them to sprinkle on the remaining 1 cup of mozzarella and 2 tablespoons of Parmesan cheese. Using a Japanese chef knife for precise cutting makes portioning the finished dish a breeze, creating clean edges that make your presentation restaurant-quality.

Another 10-12 minutes in the oven uncovered creates that irresistible golden, bubbly cheese top that makes everyone’s mouth water. The hardest part? Waiting those final 10 minutes after taking them out of the oven – but this rest time allows everything to settle and makes serving much easier. The shells will be piping hot, the cheese will be perfectly melted, and the sauce will have infused every bite with flavor.

Three Cheese Stuffed Shells Substitutions and Variations

While the classic three cheese combination in this recipe creates magic in every bite, you can easily customize these stuffed shells to suit your taste preferences or accommodate what’s already in your fridge.

Try swapping ricotta for cottage cheese if you prefer a lighter texture, or mix in some crumbled goat cheese for tangy depth. Not a mozzarella fan? Provolone works beautifully. You can also enhance the filling with chopped spinach, sautéed mushrooms, or crispy pancetta for extra flavor dimensions. The sauce is equally flexible—marinara, vodka sauce, or even a creamy alfredo. Feeling adventurous? A drizzle of pesto on top before serving takes these shells to another level.

What to Serve with Three Cheese Stuffed Shells

These three-cheese stuffed shells deserve perfect companions to round out your meal and complement their rich, savory flavors.

I love serving them with a crisp Caesar salad or arugula with lemon vinaigrette—the brightness cuts through all that cheesy goodness.

Garlic bread? Absolutely necessary for sopping up extra sauce.

For vegetables, roasted broccoli or asparagus works beautifully, especially when drizzled with olive oil and a sprinkle of sea salt.

In the summer months, a simple caprese salad brings freshness to the table.

Final Thoughts

Three-cheese stuffed shells have earned their place as one of my favorite comfort food recipes, combining simplicity with that “wow factor” that makes dinner guests think you’ve spent hours in the kitchen.

The blend of ricotta, mozzarella, and parmesan creates a creamy, indulgent filling that pairs perfectly with tangy tomato sauce.

What I love most? You can prepare them ahead of time, making them ideal for busy weeknights or special gatherings. Just assemble, refrigerate, and bake when needed.

And don’t those golden bubbles of cheese on top make your mouth water? Pure comfort in every bite, without the fuss.

If you’re craving something with a heartier protein component, try a beef stroganoff recipe that offers the same comforting creaminess with savory ground meat.

For a similar Italian comfort food experience, try baked ziti which combines many of the same cheeses with al dente pasta and savory Italian sausage.

Conclusion

I’m truly obsessed with these Three Cheese Stuffed Shells, and I think you will be too. They’re the perfect balance of simplicity and indulgence, making them ideal for both weeknight dinners and special occasions. The creamy cheese filling, tender pasta, and rich marinara create a comforting dish that’ll have everyone asking for seconds. Try them once, and they’ll likely become a permanent addition to your recipe collection.

Mandy Stout

I love feeding my family and sharing all my favorite recipes, kitchen tricks, and real-life cooking moments.

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